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Clinical Concept Extraction on i2b2 2012 (test)

80.91Exact F1BERTlarge
70.676473.333275.9978.6468Feb 22, 2019

Evaluation results

MethodLinks
BERTlargePre-training Corpus=MIMIC2019.0280.91
ELMoPre-training Corpus=MIMIC2019.0280.5
BERTbasePre-training Corpus=MIMIC2019.0280.34
BERTlargePre-training Corpus=General2019.0278.14
BioBERTPre-training Corpus=General2019.0277.77
BERTbasePre-training Corpus=General2019.0276.62
ELMoPre-training Corpus=General2019.0276.61
GloVePre-training Corpus=MIMIC2019.0275.27
word2vecPre-training Corpus=MIMIC2019.0275.09
GloVePre-training Corpus=General2019.0274.95
fastTextPre-training Corpus=MIMIC2019.0274.83
fastTextPre-training Corpus=General2019.0273.24
word2vecPre-training Corpus=General2019.0271.07