Cell-type classification on PanNuke Cls.-Eval (test)
0.3569Macro F1PanNuke-trained model
Evaluation results
| Method | Links | ||
|---|---|---|---|
| PanNuke-trained modelSupervision=Standard manual supervised setup2026.04 | 0.3569 | 0.5696 | |
| ST-guided nuclei analysis frameworkHierarchical classification=true, Supervision=Spatial Transcriptomics (ST)2026.04 | 0.3492 | 0.5359 | |
| ST-guided nuclei analysis framework (w/o Hier)Hierarchical classification=false, Supervision=Spatial Transcriptomics (ST)2026.04 | 0.3034 | 0.3041 | |
| AUCellMethod type=reference-free baseline2026.04 | 0.2309 | 0.2325 | |
| CellassignMethod type=reference-free baseline2026.04 | 0.1919 | 0.256 | |
| TopDownMethod type=reference-free baseline2026.04 | 0.1459 | 0.1261 | |
| UCellMethod type=reference-free baseline2026.04 | 0.1297 | 0.1595 |