Biomedical Natural Language Processing on BLURB benchmark leaderboard · SOTA2 Research

Biomedical Natural Language Processing on BLURB

94.04BC5-chemBioLinkBERT

Evaluation Results

Method	Links
BioLinkBERT2022.03		94.04	86.39	88.76	85.18	80.06	74.19	79.98	83.35	84.9	93.63	84.87	72.18	94.82	84.3
BioLinkBERT2022.03		93.75	86.1	88.18	84.9	79.03	73.97	77.57	82.72	84.39	93.25	84.35	70.2	91.43	83.39
PubMedBERT2022.03		93.33	85.62	87.82	84.52	80.06	73.38	77.24	82.36	82.34	92.3	82.32	55.84	87.56	81.1
PubMedBERT2020.07		93.33	85.62	87.82	84.52	79.1	73.38	77.24	82.36	83.96	92.3	82.32	55.84	87.56	81.16
BioBERT2020.07		92.85	84.7	89.13	83.82	78.55	73.18	76.14	80.88	82.36	89.52	81.54	60.24	84.14	80.34
SciBERT2020.07		92.51	84.7	88.25	83.36	78.51	73.06	75	81.22	81.34	87.15	81.16	51.4	74.22	78.14
SciBERT2020.07		92.49	84.54	88.1	83.36	78.68	73.12	75.24	81.06	82.38	86.25	80.66	57.38	78.86	78.86
BlueBERT2020.07		91.19	83.69	88.04	81.87	77.71	72.54	71.46	77.78	79.15	85.38	80.48	48.44	68.71	76.27
ClinicalBERT2020.07		90.8	83.04	86.32	81.71	78.07	72.06	72.04	78.2	80.48	91.23	80.74	49.08	68.5	77.29
BERT2020.07		89.99	79.92	85.87	81.23	77.51	71.7	71.54	79.34	79.61	81.4	80.12	49.96	74.44	75.86
RoBERTa2020.07		89.43	80.65	86.62	80.9	77.86	73.02	72.98	79.52	80.63	81.25	79.66	52.84	75.2	76.46
BERT2020.07		89.25	81.44	85.67	80.9	77.69	72.34	71.86	80.04	80.41	82.68	80.2	51.62	70.36	76.11