Biomarker Segmentation on Electron Microscopy (EM) (test)
88.89mIoUOurs
Evaluation results
| Method | Links | |||||||
|---|---|---|---|---|---|---|---|---|
| Oursfrom-scratch=true2025.06 | 88.89 | 94.09 | 94.81 | 93.43 | 0.4 | 2.6934 | 0.8552 | |
| ReN-UNet2025.04 | 87.93 | 93.55 | 92.86 | 94.37 | 0.28 | 5.3703 | 0.3047 | |
| UNet++fine-tuned=true, reproduced=true2025.06 | 87.01 | 92.49 | 92.53 | 93.38 | 0.42 | 4.7633 | 1.1553 | |
| UNet++2025.04 | 87.01 | 92.49 | 92.53 | 93.38 | 0.42 | 4.7633 | 1.1553 | |
| U2-Netfine-tuned=true, reproduced=true2025.06 | 86.31 | 92.01 | 91.92 | 92.88 | 0.41 | 20.817 | 4.375 | |
| U2-Net2025.04 | 86.31 | 92.01 | 91.92 | 92.88 | 0.41 | 20.817 | 4.375 | |
| PVT-CASCADEfine-tuned=true, reproduced=true2025.06 | 86.28 | 92.05 | 91.64 | 93.28 | 0.44 | 26.84 | 5.6181 | |
| EMCADfine-tuned=true, reproduced=true2025.06 | 86.02 | 92.43 | 93.97 | 91.02 | 0.55 | 19.857 | 4.1666 | |
| UCTransNetfine-tuned=true, reproduced=true2025.06 | 85.99 | 92.32 | 91.55 | 93.24 | 0.46 | 6.7678 | 1.5115 | |
| UCTransNet2025.04 | 85.99 | 92.32 | 91.55 | 93.24 | 0.46 | 6.7678 | 1.5115 | |
| FusionU-Netfine-tuned=true, reproduced=true2025.06 | 85.92 | 92.37 | 93.99 | 90.87 | 0.53 | 4.136 | 1.1485 | |
| nnU-Netfine-tuned=true, reproduced=true2025.06 | 85.02 | 91.86 | 94.75 | 89.23 | 0.64 | 5.2735 | 1.2231 | |
| nnUNet2025.04 | 85.02 | 91.86 | 94.75 | 89.23 | 0.64 | 5.2735 | 1.2231 | |
| TransUNetfine-tuned=true, reproduced=true2025.06 | 84.86 | 91.77 | 94.33 | 89.42 | 0.62 | 6.1746 | 1.4101 | |
| TransUNet2025.04 | 84.86 | 91.77 | 94.33 | 89.42 | 0.62 | 6.1746 | 1.4101 | |
| SegResNetfine-tuned=true, reproduced=true2025.06 | 84.51 | 90.87 | 92.79 | 90.13 | 0.61 | 29.482 | 6.5738 | |
| Swin-Unetfine-tuned=true, reproduced=true2025.06 | 83.72 | 91.08 | 92.18 | 90.1 | 0.59 | 9.7707 | 1.8287 | |
| Swin-Unet2025.04 | 83.72 | 91.08 | 92.18 | 90.1 | 0.59 | 9.7707 | 1.8287 | |
| Hover-Netfine-tuned=true, reproduced=true2025.06 | 79.18 | 88.31 | 91.43 | 85.55 | 0.84 | 12.624 | 2.1152 | |
| Hover-Net2025.04 | 79.18 | 88.31 | 91.43 | 85.55 | 0.84 | 12.624 | 2.1152 | |
| U-Netfine-tuned=true, reproduced=true2025.06 | 77.45 | 85.37 | 88.82 | 84.95 | 1 | 46.803 | 10.658 | |
| U-Net2025.04 | 77.45 | 85.37 | 88.82 | 84.95 | 1 | 46.803 | 10.658 |