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Papers Benchmarks Datasets Tasks

PROTEINS dataset and benchmarks – Page 3 · SOTA2 Research

Research Datasets

PROTEINS

Benchmarks

Task NameDataset NameSOTA MethodSort

Task NameDataset NameSOTA ResultTrendResults

Graph Clustering

PROTEINS

74.6Accuracy

8

Cross-domain graph classification

PROTEINS → BZR 5-shot

58.6Accuracy

7

Counterfactual Explanation

PROTEINS (test)

65.41Validity

7

Counterfactual Explanation

PROTEINS

65.41Validity

7

Graph Classification

PROTEINS biology chemistry (85/15 stratified train test)

76.76Accuracy

7

Graph Classification

PROTEINS Standard

74.4Accuracy

7

Graph Classification

Proteins Full (PF)

74.8Accuracy

7

Graph Generation

PROTEINS

0.03MMD Degree

6

Graph Reconstruction

PROTEINS

62.1Edge F1

6

Adjacency Matrix Reconstruction

PROTEINS (test)

99.58ROC AUC

6

Node Classification

PROTEINS

73.5Accuracy

5

Molecular Classification

PROTEINS

77.07Accuracy

5

PROTEINS

77.43AP

5

PROTEINS

21.7AP

5

Minimum Vertex Cover

PROTEINS slice (test)

24.96Avg Vertex Cover Size

5

Empirical total runtime

PROTEINS

189.34Total Runtime (s)

4

Graph Generation

PROTEINS

91.8Memorization

4

Graph Classification

PROTEINS (transductive)

89.09Accuracy

4

Graph Generation

PROTEINS

0Mem. Rate

3

Graph-level Tasks

PROTEINS (test)

0.002Inference Time (s)

3

Graph Generation

PROTEINS

-354.86Recon LogP

2

Protein structure refinement

proteins 6 example

10.9Phase 1 Runtime (min)

2

Graph Generation

PROTEINS

0Head Miss

2

Graph Classification

PROTEINS full

1Runtime (s)

1

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Popular tasks

Graph Classification Graph generation Subgraph Alignment Classification Graph Reconstruction

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