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ResearchFormerly WizWand

PBMC

Benchmarks

TaskDatasetSOTA resultTrendResults

Perturbation prediction

PBMC

81DE Overlap

22

PBMC

79.8Homogeneity

14

Single-cell Denoising

PBMC OpenProblems benchmark

0.711Mean Score

11

Single-Cell Gene Regulatory Network Inference

PBMC human

0.244AUPRC

10

On-domain cell identity prediction

PBMC10K

96Macro F1 Score

10

PBMC (held-out)

0.71Score

9

PBMC 3k

92ARI

9

Gene Representation Learning

PBMC (test)

92Average Score

9

PBMC

2.33Average Rank

9

Cell type clustering

PBMC

0.64ARI

8

PBMC

0.743ARI

7

Representation Learning

PBMC3k

88Rec Score

7

scRNA-seq integration

pbmc

88.6Batch Correction

7

Symbolic Density Estimation

PBMC gene 4046

0.126MSE

6

Biological process inference

pbmc3k

90.21Mean LLM Confidence Score

6

Gene rank reconstruction

PBMC12k

6L-Dist

6

PBMC10k

0.916SCC

6

Gene Regulatory Network Inference

PBMC

0.01p-value

5

Single-cell Differential Abundance Estimation

PBMC semi-synthetic 68k cells

1Correlation (rho) for AUC

5

Batch effect correction

PBMC

0.75Biological Conservation Score

5

Multi-batch integration

PBMC12k

0.976Batch Score

5

Dual condition generation

PBMC

5.37WD

4

Gene level performance

PBMC3k

0.07MSE

4

Single conditional generation

PBMC3K

16.94WD

4

Gene level performance evaluation

PBMC

0.02MSE

4