scFates
A scalable Python suite for fast tree inference and advanced pseudotime downstream analysis, with a focus on fate biasing.
What it does
A scalable Python suite for fast tree inference and advanced pseudotime downstream analysis, with a focus on fate biasing. Compatible with anndata object format used in scanpy or scvelo pipelines. Offers two tree inference algorithms: ElPiGraph and Simple PPT.
- Tree inference
- Pseudotime analysis
- Fate biasing
- scRNAseq data analysis
- Category
- Scientific models
- Public API
- Not offered
Not yet disclosed: deployment options, platforms, languages and support channels.
Pricing
- Free plan$0
Prices as published by scFates, checked Oct 2026.
Security and compliance
No security details published yet
scFates hasn't published certifications or security practices for scFates that we could find. Ask their team for audit reports.
Reviews
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