List your company

Medaka

Healthcare data and research · by Oxford Nanopore Technologies

Open-source tool to create consensus sequences and variant calls from nanopore sequencing data using neural networks applied to a pileup of individual sequencing reads against a reference sequence. Outperforms graph-based and signal-based methods whilst being faster.

Visit website

Where it ranks

Current edition · updated Oct 20, 2026

What it does

Open-source tool to create consensus sequences and variant calls from nanopore sequencing data using neural networks applied to a pileup of individual sequencing reads against a reference sequence. Outperforms graph-based and signal-based methods whilst being faster.

  • Nanopore sequence correction
  • Consensus sequence generation
  • Variant calling
Category
Healthcare data and research
Users
Nanopore sequencing researchers, Bioinformaticians
Public API
Not offered
Deployment
Self-hosted

Not yet disclosed: platforms, languages and support channels.

Pricing

Pricing isn't published

Oxford Nanopore Technologies doesn't list prices publicly. Ask them for a quote.

Security and compliance

No security details published yet

Oxford Nanopore Technologies hasn't published certifications or security practices for Medaka that we could find. Ask their team for audit reports.

Reviews

No reviews yet

Reviews come from people who use Medaka at work. Share how your team uses it to help other buyers decide.

Write a review

Alternatives

See the full ranking

  • HealthKey AI-Powered Patient Identification

    by HealthKey

    An AI-powered service that integrates with EHR systems to analyze patient data and scan for clinical trial candidates based on encoded eligibility criteria, delivering pre-scree...

    #1 in Analyze data

  • Novaflow

    AI-driven bioinformatics analysis platform offering a natural language interface, automated pipeline execution, pipeline generation, and data visualization for workflows such as...

    #2 in Analyze data

  • Frekil

    Automated real-world evidence (RWE) platform for life sciences.

    #3 in Analyze data

  • Syntra Platform

    by Syntra

    One unified system of record and reasoning engine for medical chart intelligence.

    #4 in Analyze data

  • EIQ

    by Ensemble Health Partners

    An AI-powered solution that analyzes medical records to identify denial, coding, and documentation risks with actionable recommendations integrated into existing clinical workfl...

    #6 in Analyze data

  • Newton Growth

    by Newton

    Tracks patient journeys from ad click to chair to calculate true acquisition cost and marketing ROI, featuring a native CRM and booking widget.

    #7 in Analyze data

Is this your product?

Claim it to keep details accurate and submit evidence for the next ranking review.

Claim Medaka