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Juicer

Healthcare data and research · by Juicer

A platform for analyzing kilobase resolution Hi-C data, including a pipeline for generating Hi-C maps from FASTQ raw data files and command line tools for feature annotation on the Hi-C maps. The main repository is focused on the Juicer 2.0 release under active development; Juicer 1.6 is the last stable release.

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What it does

A platform for analyzing kilobase resolution Hi-C data, including a pipeline for generating Hi-C maps from FASTQ raw data files and command line tools for feature annotation on the Hi-C maps. The main repository is focused on the Juicer 2.0 release under active development; Juicer 1.6 is the last stable release.

  • analyzing loop-resolution Hi-C experiments
  • generating Hi-C maps from FASTQ raw data files
  • feature annotation on Hi-C maps
Category
Healthcare data and research
Users
genomics researchers, bioinformatics users
Public API
Not offered
Deployment
Self-hosted

Not yet disclosed: platforms, languages and support channels.

Pricing

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Security and compliance

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