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Juicer
A platform for analyzing kilobase resolution Hi-C data, including a pipeline for generating Hi-C maps from FASTQ raw data files and command line tools for feature annotation on...
What is Juicer?
A platform for analyzing kilobase resolution Hi-C data, including a pipeline for generating Hi-C maps from FASTQ raw data files and command line tools for feature annotation on the Hi-C maps. The main repository is focused on the Juicer 2.0 release under active development; Juicer 1.6 is the last stable release.
Product typeHealthcare Data & Research
Pricing ·
DeploymentSelf-hosted
APINot available
What teams use Juicer for
analyzing loop-resolution Hi-C experiments
generating Hi-C maps from FASTQ raw data files
feature annotation on Hi-C maps
Integrations and access
Platforms, integrations, and language support vary by plan and region. Confirm final requirements with the vendor.
Platforms
IntegrationsAPI and webhooks
Languages
Support
What reviewers say
Community reviewsReviews are owned and editable by their authors.
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Enterprise readiness
Compliance claims are normalized from current vendor documentation and independently reviewed by SOTA2.
Data retention:
Benchmarks and comparisons
Independent benchmarksStructured task results are being verified.
Side-by-side comparisonsComparison workspaces will be available in a later release.
