CNNScoreVariants

CNNScoreVariants is a variant filtering tool within the GATK (Genome Analysis Toolkit) suite that annotates a VCF with scores from a Convolutional Neural Network.

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Founded: Not disclosed
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Company size: Not disclosed
Products tracked: 4

Products by CNNScoreVariants

4 products

Base Quality Score Recalibration (BQSR)Data pre-processing step that detects systematic errors made by sequencing machines when estimating base call accuracy, applying machine learning to model errors empirically and...0.00 reviewsHealthcare Data & Research

CNNScoreVariantsAnnotates a VCF with scores from a Convolutional Neural Network.0.00 reviewsHealthcare Data & Research

HaplotypeCallerA GATK tool for calling germline SNPs and indels simultaneously via local de-novo assembly of haplotypes in an active region.0.00 reviewsHealthcare Data & Research

Mutect2Call somatic short mutations (SNVs and indels) via local assembly of haplotypes using a Bayesian somatic genotyping model and the assembly-based machinery of HaplotypeCaller.0.00 reviewsHealthcare Data & Research

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