CNNScoreVariants
CNNScoreVariants is a variant filtering tool within the GATK (Genome Analysis Toolkit) suite that annotates a VCF with scores from a Convolutional Neural Network.
About CNNScoreVariants
CNNScoreVariants is a variant filtering tool within the GATK (Genome Analysis Toolkit) suite that annotates a VCF with scores from a Convolutional Neural Network.
Products
Data pre-processing step that detects systematic errors made by sequencing machines when estimating base call accuracy, applying machine learning to model errors empirically and...
Annotates a VCF with scores from a Convolutional Neural Network.
A GATK tool for calling germline SNPs and indels simultaneously via local de-novo assembly of haplotypes in an active region.
Call somatic short mutations (SNVs and indels) via local assembly of haplotypes using a Bayesian somatic genotyping model and the assembly-based machinery of HaplotypeCaller.
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