Command-line tool to generate BAM statistics and PDF/HTML reports for whole genome, RNA, and capture/exome sequencing, designed for the UMC HPC cluster.
What customers say
“GitHub Copilot will bring huge benefits to our engineering teams by reducing the amount of time spent on boilerplate code, keeping the teams in their flow state, allowing them to ship high-quality products to market faster.”
“GitHub's endless plug-ins, beautiful UI, and optimized workflows make devs happy. Happy and empowered engineers write the best code, make better decisions, and have more time to innovate.”
Jen Peck Senior Director of Engineering @ RedfinbamMetrics customer
“At Uber, we continuously strive to improve our developer experience. We migrated code hosting and review to GitHub and are adopting GitHub Copilot to boost overall developer productivity.”
Ali-Reza Adl-Tabatabai Senior Director of Engineering @ UberbamMetrics customer
Security and compliance
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GitHub has integrated Anthropic’s Claude Opus 5 model into GitHub Copilot. The model is designed to support complex coding tasks requiring advanced reasoning and autonomous execution, such as regression verification and multi-tool coordination. Claude Opus 5 includes enhanced security safeguards for cyber-related content and is available to Copilot Pro+, Max, Business, and Enterprise users across multiple platforms, including Visual Studio Code and GitHub Mobile.
Copilot Cloud Agent Integration Launched for Linear
The GitHub Copilot cloud agent is now generally available for Linear. Users can assign Linear issues to the agent, which analyzes contents to create draft pull requests, executes in ephemeral development environments via GitHub Actions, and provides progress updates directly in the Linear activity timeline. The integration offers configurable agent settings, including model selection and branch targeting, for Copilot Pro, Pro+, Business, and Enterprise customers.
