# Molecular prediction on ToxCast full-shot (test)

Source: [Molecular prediction on ToxCast full-shot (test)](<https://www.sota2.com/research/sota/molecular-prediction-on-toxcast-full-shot-test>)

Collection index: [llms.txt](<https://www.sota2.com/research/llms.txt>)

Data updated: 2026-05-18T06:27:30.044Z

Evaluation of molecular prediction performance on the full-shot test split of the ToxCast dataset, typically measured using ROC-AUC.

A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage.

| Scope | Recorded value |
| --- | --- |
| Task | Molecular prediction |
| Dataset (including any stated split) | ToxCast full-shot (test) |
| Metric | ROC-AUC |
| Unit | PERCENT |
| Direction | Higher is better |
| Results loaded | 25 of 25 |
| Coverage | All results currently returned for this benchmark |

Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol.

## Metrics

- [ROC-AUC](<https://www.sota2.com/research/sota/molecular-prediction-on-toxcast-full-shot-test.md?metric=ROC-AUC>): Higher is better; unit: PERCENT.

## Recorded results

| Method | ROC-AUC | Result date | Report paper |
| --- | --- | --- | --- |
| SUPTsoft | 68.5 | Not recorded | 68fa72361e209131cea54f7c |
| SUPThard | 68.4 | Not recorded | 68fa72361e209131cea54f7c |
| GPF-plus | 67.72 | Not recorded | 68fa72361e209131cea54f7c |
| GPF | 67.68 | Not recorded | 68fa72361e209131cea54f7c |
| SUPTsoft | 67.02 | Not recorded | 68fa72361e209131cea54f7c |
| SUPThard | 66.79 | Not recorded | 68fa72361e209131cea54f7c |
| SUPTsoft | 66.65 | Not recorded | 68fa72361e209131cea54f7c |
| SUPTsoft | 66.53 | Not recorded | 68fa72361e209131cea54f7c |
| GPF-plus | 66.53 | Not recorded | 68fa72361e209131cea54f7c |
| SUPThard | 66.48 | Not recorded | 68fa72361e209131cea54f7c |
| SUPThard | 66.44 | Not recorded | 68fa72361e209131cea54f7c |
| FT | 66.39 | Not recorded | 68fa72361e209131cea54f7c |
| FT | 66.29 | Not recorded | 68fa72361e209131cea54f7c |
| GPF | 66.09 | Not recorded | 68fa72361e209131cea54f7c |
| GPF | 65.96 | Not recorded | 68fa72361e209131cea54f7c |
| GPF-plus | 65.83 | Not recorded | 68fa72361e209131cea54f7c |
| GPF | 65.7 | Not recorded | 68fa72361e209131cea54f7c |
| GPF-plus | 65.66 | Not recorded | 68fa72361e209131cea54f7c |
| FT | 65.34 | Not recorded | 68fa72361e209131cea54f7c |
| FT | 65.16 | Not recorded | 68fa72361e209131cea54f7c |
| SUPTsoft | 63.42 | Not recorded | 68fa72361e209131cea54f7c |
| SUPThard | 63.35 | Not recorded | 68fa72361e209131cea54f7c |
| FT | 62.54 | Not recorded | 68fa72361e209131cea54f7c |
| GPF-plus | 61.47 | Not recorded | 68fa72361e209131cea54f7c |
| GPF | 60.73 | Not recorded | 68fa72361e209131cea54f7c |

### SUPTsoft

ROC-AUC: 68.5. Result ID: 6a0ab07e47f34ce924f016c4.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"ContextPred"}. This record does not assert independent reproduction.

### SUPThard

ROC-AUC: 68.4. Result ID: 6a0ab07e47f34ce924f016c3.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"ContextPred"}. This record does not assert independent reproduction.

### GPF-plus

ROC-AUC: 67.72. Result ID: 6a0ab07e47f34ce924f016c2.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"ContextPred"}. This record does not assert independent reproduction.

### GPF

ROC-AUC: 67.68. Result ID: 6a0ab07e47f34ce924f016c1.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"ContextPred"}. This record does not assert independent reproduction.

### SUPTsoft

ROC-AUC: 67.02. Result ID: 6a0ab07e47f34ce924f016bf.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"AttrMasking"}. This record does not assert independent reproduction.

### SUPThard

ROC-AUC: 66.79. Result ID: 6a0ab07e47f34ce924f016be.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"AttrMasking"}. This record does not assert independent reproduction.

### SUPTsoft

ROC-AUC: 66.65. Result ID: 6a0ab07e47f34ce924f016ce.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"EdgePred"}. This record does not assert independent reproduction.

### SUPTsoft

ROC-AUC: 66.53. Result ID: 6a0ab07e47f34ce924f016ba.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"Infomax"}. This record does not assert independent reproduction.

### GPF-plus

ROC-AUC: 66.53. Result ID: 6a0ab07e47f34ce924f016bd.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"AttrMasking"}. This record does not assert independent reproduction.

### SUPThard

ROC-AUC: 66.48. Result ID: 6a0ab07e47f34ce924f016b9.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"Infomax"}. This record does not assert independent reproduction.

### SUPThard

ROC-AUC: 66.44. Result ID: 6a0ab07e47f34ce924f016cd.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"EdgePred"}. This record does not assert independent reproduction.

### FT

ROC-AUC: 66.39. Result ID: 6a0ab07e47f34ce924f016c0.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"ContextPred"}. This record does not assert independent reproduction.

### FT

ROC-AUC: 66.29. Result ID: 6a0ab07e47f34ce924f016ca.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"EdgePred"}. This record does not assert independent reproduction.

### GPF

ROC-AUC: 66.09. Result ID: 6a0ab07e47f34ce924f016bc.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"AttrMasking"}. This record does not assert independent reproduction.

### GPF

ROC-AUC: 65.96. Result ID: 6a0ab07e47f34ce924f016b7.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"Infomax"}. This record does not assert independent reproduction.

### GPF-plus

ROC-AUC: 65.83. Result ID: 6a0ab07e47f34ce924f016b8.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"Infomax"}. This record does not assert independent reproduction.

### GPF

ROC-AUC: 65.7. Result ID: 6a0ab07e47f34ce924f016cb.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"EdgePred"}. This record does not assert independent reproduction.

### GPF-plus

ROC-AUC: 65.66. Result ID: 6a0ab07e47f34ce924f016cc.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"EdgePred"}. This record does not assert independent reproduction.

### FT

ROC-AUC: 65.34. Result ID: 6a0ab07e47f34ce924f016bb.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"AttrMasking"}. This record does not assert independent reproduction.

### FT

ROC-AUC: 65.16. Result ID: 6a0ab07e47f34ce924f016b6.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"Infomax"}. This record does not assert independent reproduction.

### SUPTsoft

ROC-AUC: 63.42. Result ID: 6a0ab07e47f34ce924f016c9.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"GCL"}. This record does not assert independent reproduction.

### SUPThard

ROC-AUC: 63.35. Result ID: 6a0ab07e47f34ce924f016c8.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"GCL"}. This record does not assert independent reproduction.

### FT

ROC-AUC: 62.54. Result ID: 6a0ab07e47f34ce924f016c5.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

Recorded evaluation configuration: {"Pre-training Strategy":"GCL"}. This record does not assert independent reproduction.

### GPF-plus

ROC-AUC: 61.47. Result ID: 6a0ab07e47f34ce924f016c7.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"GCL"}. This record does not assert independent reproduction.

### GPF

ROC-AUC: 60.73. Result ID: 6a0ab07e47f34ce924f016c6.

[Reporting paper](<https://www.sota2.com/research/paper/68fa72361e209131cea54f7c.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa72d01e209131cea58ad5.md>)

[Implementation](<https://github.com/zjunet/GPF>)

Recorded evaluation configuration: {"Pre-training Strategy":"GCL"}. This record does not assert independent reproduction.

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