# Metabolite Identification on GNPS-M Source: [Metabolite Identification on GNPS-M]() Collection index: [llms.txt]() Data updated: 2026-03-17T07:40:05.921Z Evaluation of Metabolite Identification performance on the GNPS-M dataset, measured by Accuracy. A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage. | Scope | Recorded value | | --- | --- | | Task | Metabolite Identification | | Dataset (including any stated split) | GNPS-M | | Metric | Accuracy | | Unit | PERCENT | | Direction | Higher is better | | Results loaded | 18 of 18 | | Coverage | All results currently returned for this benchmark | Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol. ## Metrics - [Accuracy](): Higher is better; unit: PERCENT. ## Recorded results | Method | Accuracy | Result date | Report paper | | --- | --- | --- | --- | | SF-Matching | 93.81 | Not recorded | 69b8e0080636e5bf4afbe9ca | | SF-Matching | 92.27 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CMSSP | 85.57 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MS2MetGAN | 79.9 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CMSSP | 79.38 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MIDAS | 73.2 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MS2MetGAN | 72.16 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MAGMa+ | 53.61 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MIDAS | 47.94 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MetFrag | 44.85 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CSU-MS2 | 44.33 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CFM-ID | 38.14 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MAGMa+ | 30.41 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CFM-ID | 29.9 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CSU-MS2 | 28.87 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CSI:FingerID | 22.68 | Not recorded | 69b8e0080636e5bf4afbe9ca | | CSI:FingerID | 21.65 | Not recorded | 69b8e0080636e5bf4afbe9ca | | MetFrag | 17.01 | Not recorded | 69b8e0080636e5bf4afbe9ca | ### SF-Matching Accuracy: 93.81. Result ID: 69b904fc47f34ce924a13396. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### SF-Matching Accuracy: 92.27. Result ID: 69b904fc47f34ce924a133e9. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CMSSP Accuracy: 85.57. Result ID: 69b904fc47f34ce924a133ee. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MS2MetGAN Accuracy: 79.9. Result ID: 69b904fc47f34ce924a1339d. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CMSSP Accuracy: 79.38. Result ID: 69b904fc47f34ce924a1339b. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MIDAS Accuracy: 73.2. Result ID: 69b904fc47f34ce924a133e8. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MS2MetGAN Accuracy: 72.16. Result ID: 69b904fc47f34ce924a133f0. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MAGMa+ Accuracy: 53.61. Result ID: 69b904fc47f34ce924a133ea. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MIDAS Accuracy: 47.94. Result ID: 69b904fc47f34ce924a13395. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MetFrag Accuracy: 44.85. Result ID: 69b904fc47f34ce924a1339a. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CSU-MS2 Accuracy: 44.33. Result ID: 69b904fc47f34ce924a133ef. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CFM-ID Accuracy: 38.14. Result ID: 69b904fc47f34ce924a13399. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MAGMa+ Accuracy: 30.41. Result ID: 69b904fc47f34ce924a13397. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CFM-ID Accuracy: 29.9. Result ID: 69b904fc47f34ce924a133ec. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CSU-MS2 Accuracy: 28.87. Result ID: 69b904fc47f34ce924a1339c. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CSI:FingerID Accuracy: 22.68. Result ID: 69b904fc47f34ce924a133eb. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### CSI:FingerID Accuracy: 21.65. Result ID: 69b904fc47f34ce924a13398. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MetFrag Accuracy: 17.01. Result ID: 69b904fc47f34ce924a133ed. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. Page 1 of 1. This is an index page, not the full collection.