# Metabolite Identification on EMBL-MCF

Source: [Metabolite Identification on EMBL-MCF](<https://www.sota2.com/research/sota/metabolite-identification-on-embl-mcf>)

Collection index: [llms.txt](<https://www.sota2.com/research/llms.txt>)

Data updated: 2026-03-17T07:40:05.950Z

Evaluation of Metabolite Identification performance on the EMBL-MCF dataset, measured by Accuracy.

A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage.

| Scope | Recorded value |
| --- | --- |
| Task | Metabolite Identification |
| Dataset (including any stated split) | EMBL-MCF |
| Metric | Accuracy |
| Unit | PERCENT |
| Direction | Higher is better |
| Results loaded | 18 of 18 |
| Coverage | All results currently returned for this benchmark |

Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol.

## Metrics

- [Accuracy](<https://www.sota2.com/research/sota/metabolite-identification-on-embl-mcf.md?metric=Accuracy>): Higher is better; unit: PERCENT.

## Recorded results

| Method | Accuracy | Result date | Report paper |
| --- | --- | --- | --- |
| MS2MetGAN | 93.25 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MS2MetGAN | 93.25 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CSI:FingerID | 65.6 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CFM-ID | 54.02 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MIDAS | 53.38 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CSI:FingerID | 50.16 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MIDAS | 43.41 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| SF-Matching | 40.84 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CMSSP | 25.08 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CSU-MS2 | 22.19 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CSU-MS2 | 22.19 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MetFrag | 21.54 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| SF-Matching | 20.9 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MAGMa+ | 20.9 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MAGMa+ | 13.18 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CMSSP | 11.25 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| CFM-ID | 8.36 | Not recorded | 69b8e0080636e5bf4afbe9ca |
| MetFrag | 2.57 | Not recorded | 69b8e0080636e5bf4afbe9ca |

### MS2MetGAN

Accuracy: 93.25. Result ID: 69b904fc47f34ce924a133a6.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

[Method origin paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MS2MetGAN

Accuracy: 93.25. Result ID: 69b904fc47f34ce924a133f9.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

[Method origin paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CSI:FingerID

Accuracy: 65.6. Result ID: 69b904fc47f34ce924a133a1.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CFM-ID

Accuracy: 54.02. Result ID: 69b904fc47f34ce924a133a2.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MIDAS

Accuracy: 53.38. Result ID: 69b904fc47f34ce924a133f1.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CSI:FingerID

Accuracy: 50.16. Result ID: 69b904fc47f34ce924a133f4.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MIDAS

Accuracy: 43.41. Result ID: 69b904fc47f34ce924a1339e.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### SF-Matching

Accuracy: 40.84. Result ID: 69b904fc47f34ce924a1339f.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CMSSP

Accuracy: 25.08. Result ID: 69b904fc47f34ce924a133a4.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CSU-MS2

Accuracy: 22.19. Result ID: 69b904fc47f34ce924a133a5.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa65501e209131cea09957.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CSU-MS2

Accuracy: 22.19. Result ID: 69b904fc47f34ce924a133f8.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa65501e209131cea09957.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MetFrag

Accuracy: 21.54. Result ID: 69b904fc47f34ce924a133a3.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### SF-Matching

Accuracy: 20.9. Result ID: 69b904fc47f34ce924a133f2.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MAGMa+

Accuracy: 20.9. Result ID: 69b904fc47f34ce924a133f3.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MAGMa+

Accuracy: 13.18. Result ID: 69b904fc47f34ce924a133a0.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CMSSP

Accuracy: 11.25. Result ID: 69b904fc47f34ce924a133f7.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### CFM-ID

Accuracy: 8.36. Result ID: 69b904fc47f34ce924a133f5.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

### MetFrag

Accuracy: 2.57. Result ID: 69b904fc47f34ce924a133f6.

[Reporting paper](<https://www.sota2.com/research/paper/69b8e0080636e5bf4afbe9ca.md>)

Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction.

Page 1 of 1. This is an index page, not the full collection.
