# Marginal Log-Likelihood Estimation on DS3 36 Taxa, 1812 Sites Source: [Marginal Log-Likelihood Estimation on DS3 36 Taxa, 1812 Sites]() Collection index: [llms.txt]() Data updated: 2026-02-26T05:49:55.147Z Evaluation of Marginal Log-Likelihood Estimation performance on the DS3 dataset, featuring 36 Taxa and 1812 Sites. A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage. | Scope | Recorded value | | --- | --- | | Task | Marginal Log-Likelihood Estimation | | Dataset (including any stated split) | DS3 36 Taxa, 1812 Sites | | Metric | MLL | | Unit | SCALAR | | Direction | Higher is better | | Results loaded | 30 of 30 | | Coverage | All results currently returned for this benchmark | Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol. ## Metrics - [MLL](): Higher is better; unit: SCALAR. ## Recorded results | Method | MLL | Result date | Report paper | | --- | --- | --- | --- | | MrBayes SS (Replication) | -33732.79 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | VBPI-GNN | -33735.12 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | MrBayes SS | -33735.44 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33735.85 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33735.91 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33735.92 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33735.98 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33735.99 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.01 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.03 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.04 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.91 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.93 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.97 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.98 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33736.98 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33737.71 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33737.75 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33753.2 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33757.79 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33759.19 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33762.45 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | ϕ-CSMC | -33798.06 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33804.63 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33807.05 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33814.98 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | GeoPhy | -33823.74 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | CSMC | -35381.01 | Not recorded | 68fa5f4d1e209131ce9e8d62 | | VCSMC | -37211.2 | Not recorded | 68fa5f4d1e209131ce9e8d62 | ### MrBayes SS (Replication) MLL: -33732.79. Result ID: 698bc1527a967eddb7711e84. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### VBPI-GNN MLL: -33735.12. Result ID: 698bc1527a967eddb7711e85. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### MrBayes SS MLL: -33735.44. Result ID: 698bc1527a967eddb7711e83. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### GeoPhy MLL: -33735.85. Result ID: 698bc1527a967eddb7711ea0. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"full","Dimension":"4","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33735.91. Result ID: 698bc1527a967eddb7711e8b. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"diagonal","Dimension":"2","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33735.92. Result ID: 698bc1527a967eddb7711e8e. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"diagonal","Dimension":"4","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33735.98. Result ID: 698bc1527a967eddb7711e99. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"diagonal","Dimension":"4","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33735.99. Result ID: 698bc1527a967eddb7711e94. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"full","Dimension":"4","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736. Result ID: 698bc1527a967eddb7711e9a. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"diagonal","Dimension":"4","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.01. Result ID: 698bc1527a967eddb7711e9f. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"full","Dimension":"4","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.03. Result ID: 698bc1527a967eddb7711e93. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"full","Dimension":"4","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.04. Result ID: 698bc1527a967eddb7711e8d. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"diagonal","Dimension":"4","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.91. Result ID: 698bc1527a967eddb7711e97. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"diagonal","Dimension":"2","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.93. Result ID: 698bc1527a967eddb7711e91. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"full","Dimension":"2","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.97. Result ID: 698bc1527a967eddb7711e9d. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"full","Dimension":"2","CV":"LOO(3)+"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.98. Result ID: 698bc1527a967eddb7711e90. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"full","Dimension":"2","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33736.98. Result ID: 698bc1527a967eddb7711e9c. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"full","Dimension":"2","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33737.71. Result ID: 698bc1527a967eddb7711e8a. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"diagonal","Dimension":"2","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33737.75. Result ID: 698bc1527a967eddb7711e96. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"diagonal","Dimension":"2","CV":"LOO(3)"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33753.2. Result ID: 698bc1527a967eddb7711e92. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"full","Dimension":"4","CV":"LAX"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33757.79. Result ID: 698bc1527a967eddb7711e9e. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"full","Dimension":"4","CV":"LAX"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33759.19. Result ID: 698bc1527a967eddb7711e98. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"diagonal","Dimension":"4","CV":"LAX"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33762.45. Result ID: 698bc1527a967eddb7711e8c. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"diagonal","Dimension":"4","CV":"LAX"}. This record does not assert independent reproduction. ### ϕ-CSMC MLL: -33798.06. Result ID: 698bc1527a967eddb7711e88. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### GeoPhy MLL: -33804.63. Result ID: 698bc1527a967eddb7711e9b. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"full","Dimension":"2","CV":"LAX"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33807.05. Result ID: 698bc1527a967eddb7711e8f. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"full","Dimension":"2","CV":"LAX"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33814.98. Result ID: 698bc1527a967eddb7711e89. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Normal (N)","Covariance Matrix":"diagonal","Dimension":"2","CV":"LAX"}. This record does not assert independent reproduction. ### GeoPhy MLL: -33823.74. Result ID: 698bc1527a967eddb7711e95. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Distribution":"Wrapped Normal (WN)","Covariance Matrix":"diagonal","Dimension":"2","CV":"LAX"}. This record does not assert independent reproduction. ### CSMC MLL: -35381.01. Result ID: 698bc1527a967eddb7711e86. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### VCSMC MLL: -37211.2. Result ID: 698bc1527a967eddb7711e87. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. Page 1 of 1. This is an index page, not the full collection.