# Link Prediction on GALEN 10% normalized biomedical ontologies (test)

Source: [Link Prediction on GALEN 10% normalized biomedical ontologies (test)](<https://www.sota2.com/research/sota/link-prediction-on-galen-10-percent-normalized-biomedical-ontologies-test>)

Collection index: [llms.txt](<https://www.sota2.com/research/llms.txt>)

Data updated: 2026-04-15T07:12:08.782Z

Evaluation of Link Prediction performance on the test split of the GALEN 10% normalized biomedical ontologies dataset.

A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage.

| Scope | Recorded value |
| --- | --- |
| Task | Link Prediction |
| Dataset (including any stated split) | GALEN 10% normalized biomedical ontologies (test) |
| Metric | F1 Score |
| Unit | PERCENT |
| Direction | Higher is better |
| Results loaded | 10 of 10 |
| Coverage | All results currently returned for this benchmark |

Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol.

## Metrics

- [F1 Score](<https://www.sota2.com/research/sota/link-prediction-on-galen-10-percent-normalized-biomedical-ontologies-test.md?metric=F1%20Score>): Higher is better; unit: PERCENT.

## Recorded results

| Method | F1 Score | Result date | Report paper |
| --- | --- | --- | --- |
| ELBE | 24.2 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELBE | 21 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELBE + RegD | 21 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELBE + RegD | 20.6 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELBE + τBox | 19.5 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELBE + τBox | 18.4 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELEM + RegD | 18 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELEM + RegD | 16.8 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELEM | 16.7 | Not recorded | 68fa7bf31e209131cea8b85b |
| ELEM | 16.6 | Not recorded | 68fa7bf31e209131cea8b85b |

### ELBE

F1 Score: 24.2. Result ID: 69df392e47f34ce924c7866a.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa6bde1e209131cea30ba9.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"10"}. This record does not assert independent reproduction.

### ELBE

F1 Score: 21. Result ID: 69df392e47f34ce924c78669.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa6bde1e209131cea30ba9.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"5"}. This record does not assert independent reproduction.

### ELBE + RegD

F1 Score: 21. Result ID: 69df392e47f34ce924c7866e.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"10"}. This record does not assert independent reproduction.

### ELBE + RegD

F1 Score: 20.6. Result ID: 69df392e47f34ce924c7866d.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"5"}. This record does not assert independent reproduction.

### ELBE + τBox

F1 Score: 19.5. Result ID: 69df392e47f34ce924c7866c.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"10"}. This record does not assert independent reproduction.

### ELBE + τBox

F1 Score: 18.4. Result ID: 69df392e47f34ce924c7866b.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"5"}. This record does not assert independent reproduction.

### ELEM + RegD

F1 Score: 18. Result ID: 69df392e47f34ce924c78672.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"10"}. This record does not assert independent reproduction.

### ELEM + RegD

F1 Score: 16.8. Result ID: 69df392e47f34ce924c78671.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"5"}. This record does not assert independent reproduction.

### ELEM

F1 Score: 16.7. Result ID: 69df392e47f34ce924c7866f.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa65681e209131cea0a177.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"5"}. This record does not assert independent reproduction.

### ELEM

F1 Score: 16.6. Result ID: 69df392e47f34ce924c78670.

[Reporting paper](<https://www.sota2.com/research/paper/68fa7bf31e209131cea8b85b.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa65681e209131cea0a177.md>)

Recorded evaluation configuration: {"Embedding Dimension (d)":"10"}. This record does not assert independent reproduction.

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