Linear Probing on Genomic Benchmarks 2023
86MoEnEnDiffAug
Evaluation Results
| Method | Links | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| DiffAugEvaluation Protocol=Linear probing2023.09 | 86 | 94.9 | 96.8 | 74 | 94.9 | 91.8 | 94.5 | 79.9 | 89.1 | |
| SSL+RCEvaluation Protocol=Linear probing, Augmentation=RC2023.09 | 84.5 | 88.3 | 95.8 | 71.9 | 82.3 | 86.8 | 91 | 74.4 | 84.3 | |
| SSL+TranslocationEvaluation Protocol=Linear probing, Augmentation=Translocation2023.09 | 83.8 | 88.2 | 95.5 | 73.8 | 77.4 | 88.2 | 84.7 | 52.5 | 80.5 | |
| HyenaEvaluation Protocol=Linear probing2023.09 | 80.9 | 89 | 96.4 | 73.2 | 88.1 | 88.1 | 94.6 | 79.2 | 86.2 | |
| SSL+InsertionEvaluation Protocol=Linear probing, Augmentation=Insertion2023.09 | 80.9 | 89.8 | 96.6 | 73.7 | 83.4 | 87.1 | 91.8 | 77.3 | 85 | |
| SSL+MixupEvaluation Protocol=Linear probing, Augmentation=Mixup2023.09 | 80.9 | 89.4 | 96.2 | 73.2 | 85.2 | 88.6 | 91.6 | 77.9 | 85.4 | |
| NTEvaluation Protocol=Linear probing2023.09 | 70.2 | 90 | 92.3 | 71.5 | 80.8 | 87.9 | 84 | 77.2 | 81.7 | |
| DNA-BERTEvaluation Protocol=Linear probing2023.09 | 69.4 | 92.3 | 96.3 | 74.3 | 81.1 | 87.7 | 85.8 | 73.1 | 82.5 | |
| CNNEvaluation Protocol=Linear probing2023.09 | 69 | 87.6 | 93 | 58.6 | 69.5 | 93.3 | 84.6 | 68 | 76.7 |