# Gene Regulatory Network Inference on Breast cancer in pseudotime Source: [Gene Regulatory Network Inference on Breast cancer in pseudotime]() Collection index: [llms.txt]() Data updated: 2026-02-26T06:04:31.629Z Evaluation of models designed to infer gene regulatory networks using gene expression data derived from breast cancer studies analyzed via pseudotime ordering. A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage. | Scope | Recorded value | | --- | --- | | Task | Gene Regulatory Network Inference | | Dataset (including any stated split) | Breast cancer in pseudotime | | Metric | Sparsity | | Unit | SCALAR | | Direction | Higher is better | | Results loaded | 12 of 12 | | Coverage | All results currently returned for this benchmark | Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol. ## Metrics - [Sparsity](): Higher is better; unit: SCALAR. - [Balanced Acc](): Higher is better; unit: PERCENT. - [MSE](): Lower is better; unit: SCALAR. ## Recorded results | Method | Sparsity | Result date | Report paper | | --- | --- | --- | --- | | SparseFlow | 95.7 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | BioPrune | 93.44 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | DASH | 92.71 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | PINN + MP | 92 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | Iter. SynFlow | 91.93 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | DST | 67.02 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | IMP | 36.02 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | PathReg | 14.09 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | C-NODE | 11.2 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | L0 | 10.77 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | PINN | 0.11 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | | Baseline | 0.03 | Not recorded | 68fa5f6e1e209131ce9e9cf7 | ### SparseFlow Sparsity: 95.7. Result ID: 698bc6fd7a967eddb7714699. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### BioPrune Sparsity: 93.44. Result ID: 698bc6fd7a967eddb771469a. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Prior information for sparsification":true,"Suggested baseline":true}. This record does not assert independent reproduction. ### DASH Sparsity: 92.71. Result ID: 698bc6fd7a967eddb771469b. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Prior information for sparsification":true,"Suggested method":true,"Lambda values":"0.995, 0.95"}. This record does not assert independent reproduction. ### PINN + MP Sparsity: 92. Result ID: 698bc6fd7a967eddb771469c. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Prior information for sparsification":true,"Suggested baseline":true}. This record does not assert independent reproduction. ### Iter. SynFlow Sparsity: 91.93. Result ID: 698bc6fd7a967eddb7714698. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### DST Sparsity: 67.02. Result ID: 698bc6fd7a967eddb7714696. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### IMP Sparsity: 36.02. Result ID: 698bc6fd7a967eddb7714697. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### PathReg Sparsity: 14.09. Result ID: 698bc6fd7a967eddb7714694. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### C-NODE Sparsity: 11.2. Result ID: 698bc6fd7a967eddb7714693. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### L0 Sparsity: 10.77. Result ID: 698bc6fd7a967eddb7714692. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. ### PINN Sparsity: 0.11. Result ID: 698bc6fd7a967eddb7714695. [Reporting paper]() Recorded evaluation configuration: {"Prior information for sparsification":true}. This record does not assert independent reproduction. ### Baseline Sparsity: 0.03. Result ID: 698bc6fd7a967eddb7714691. [Reporting paper]() Recorded evaluation configuration: {"Prior information for sparsification":false}. This record does not assert independent reproduction. Page 1 of 1. This is an index page, not the full collection.