# Gene expression prediction on Kidney Source: [Gene expression prediction on Kidney]() Collection index: [llms.txt]() Data updated: 2026-05-15T07:41:06.084Z Evaluation of models performing gene expression prediction using the Kidney dataset, assessed using regression metrics like MSE, MAE, and PCC. A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage. | Scope | Recorded value | | --- | --- | | Task | Gene expression prediction | | Dataset (including any stated split) | Kidney | | Metric | MSE | | Unit | SCALAR | | Direction | Lower is better | | Results loaded | 32 of 32 | | Coverage | All results currently returned for this benchmark | Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol. ## Metrics - [MSE](): Lower is better; unit: SCALAR. - [MAE](): Lower is better; unit: SCALAR. - [PCC](): Higher is better; unit: SCALAR. ## Recorded results | Method | MSE | Result date | Report paper | | --- | --- | --- | --- | | DUET | 0.4067 | Not recorded | 6a06a89bdbc836b87d82a087 | | DUET | 0.4099 | Not recorded | 6a06a89bdbc836b87d82a087 | | DUET | 0.421 | Not recorded | 6a06a89bdbc836b87d82a087 | | UMPIRE | 0.4529 | Not recorded | 6a06a89bdbc836b87d82a087 | | UMPIRE | 0.4586 | Not recorded | 6a06a89bdbc836b87d82a087 | | OmiCLIP | 0.471 | Not recorded | 6a06a89bdbc836b87d82a087 | | UMPIRE | 0.4751 | Not recorded | 6a06a89bdbc836b87d82a087 | | OmiCLIP | 0.4865 | Not recorded | 6a06a89bdbc836b87d82a087 | | OmiCLIP | 0.4873 | Not recorded | 6a06a89bdbc836b87d82a087 | | EGN | 0.4937 | Not recorded | 6a06a89bdbc836b87d82a087 | | ST-Net | 0.4957 | Not recorded | 6a06a89bdbc836b87d82a087 | | ST-Net | 0.5038 | Not recorded | 6a06a89bdbc836b87d82a087 | | EGN | 0.5179 | Not recorded | 6a06a89bdbc836b87d82a087 | | His2ST | 0.5212 | Not recorded | 6a06a89bdbc836b87d82a087 | | His2ST | 0.5231 | Not recorded | 6a06a89bdbc836b87d82a087 | | BLEEP | 0.5262 | Not recorded | 6a06a89bdbc836b87d82a087 | | His2ST | 0.5274 | Not recorded | 6a06a89bdbc836b87d82a087 | | ST-Net | 0.5412 | Not recorded | 6a06a89bdbc836b87d82a087 | | BLEEP | 0.5428 | Not recorded | 6a06a89bdbc836b87d82a087 | | EGN | 0.5566 | Not recorded | 6a06a89bdbc836b87d82a087 | | mclSTExp | 0.5672 | Not recorded | 6a06a89bdbc836b87d82a087 | | mclSTExp | 0.5804 | Not recorded | 6a06a89bdbc836b87d82a087 | | BLEEP | 0.5923 | Not recorded | 6a06a89bdbc836b87d82a087 | | mclSTExp | 0.6412 | Not recorded | 6a06a89bdbc836b87d82a087 | | SCR2Net | 0.7038 | Not recorded | 6940e7e3456146936284fcc1 | | TRIPLEX | 0.7168 | Not recorded | 6940e7e3456146936284fcc1 | | mc1STExp | 0.7438 | Not recorded | 6940e7e3456146936284fcc1 | | ST-Net | 0.746 | Not recorded | 6940e7e3456146936284fcc1 | | EGN | 0.7574 | Not recorded | 6940e7e3456146936284fcc1 | | His2ST | 0.7912 | Not recorded | 6940e7e3456146936284fcc1 | | BLEEP | 0.8246 | Not recorded | 6940e7e3456146936284fcc1 | | HisToGene | 0.854 | Not recorded | 6940e7e3456146936284fcc1 | ### DUET MSE: 0.4067. Result ID: 6a06ce0647f34ce924ee1d24. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### DUET MSE: 0.4099. Result ID: 6a06ce0647f34ce924ee1d2c. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### DUET MSE: 0.421. Result ID: 6a06ce0647f34ce924ee1d1c. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### UMPIRE MSE: 0.4529. Result ID: 6a06ce0647f34ce924ee1d1b. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### UMPIRE MSE: 0.4586. Result ID: 6a06ce0647f34ce924ee1d23. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### OmiCLIP MSE: 0.471. Result ID: 6a06ce0647f34ce924ee1d22. [Reporting paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### UMPIRE MSE: 0.4751. Result ID: 6a06ce0647f34ce924ee1d2b. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### OmiCLIP MSE: 0.4865. Result ID: 6a06ce0647f34ce924ee1d1a. [Reporting paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### OmiCLIP MSE: 0.4873. Result ID: 6a06ce0647f34ce924ee1d2a. [Reporting paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### EGN MSE: 0.4937. Result ID: 6a06ce0647f34ce924ee1d27. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### ST-Net MSE: 0.4957. Result ID: 6a06ce0647f34ce924ee1d25. [Reporting paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### ST-Net MSE: 0.5038. Result ID: 6a06ce0647f34ce924ee1d1d. [Reporting paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### EGN MSE: 0.5179. Result ID: 6a06ce0647f34ce924ee1d17. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### His2ST MSE: 0.5212. Result ID: 6a06ce0647f34ce924ee1d1e. [Reporting paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### His2ST MSE: 0.5231. Result ID: 6a06ce0647f34ce924ee1d16. [Reporting paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### BLEEP MSE: 0.5262. Result ID: 6a06ce0647f34ce924ee1d28. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### His2ST MSE: 0.5274. Result ID: 6a06ce0647f34ce924ee1d26. [Reporting paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### ST-Net MSE: 0.5412. Result ID: 6a06ce0647f34ce924ee1d15. [Reporting paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### BLEEP MSE: 0.5428. Result ID: 6a06ce0647f34ce924ee1d20. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### EGN MSE: 0.5566. Result ID: 6a06ce0647f34ce924ee1d1f. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### mclSTExp MSE: 0.5672. Result ID: 6a06ce0647f34ce924ee1d29. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"500"}. This record does not assert independent reproduction. ### mclSTExp MSE: 0.5804. Result ID: 6a06ce0647f34ce924ee1d19. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### BLEEP MSE: 0.5923. Result ID: 6a06ce0647f34ce924ee1d18. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"100"}. This record does not assert independent reproduction. ### mclSTExp MSE: 0.6412. Result ID: 6a06ce0647f34ce924ee1d21. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"HVG":"300"}. This record does not assert independent reproduction. ### SCR2Net MSE: 0.7038. Result ID: 699845185698665ec4a1c361. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### TRIPLEX MSE: 0.7168. Result ID: 699845185698665ec4a1c35e. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### mc1STExp MSE: 0.7438. Result ID: 699845185698665ec4a1c360. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### ST-Net MSE: 0.746. Result ID: 699845185698665ec4a1c35a. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### EGN MSE: 0.7574. Result ID: 699845185698665ec4a1c35d. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### His2ST MSE: 0.7912. Result ID: 699845185698665ec4a1c35b. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### BLEEP MSE: 0.8246. Result ID: 699845185698665ec4a1c35f. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. ### HisToGene MSE: 0.854. Result ID: 699845185698665ec4a1c35c. [Reporting paper]() Recorded evaluation configuration: Not recorded. This record does not assert independent reproduction. Page 1 of 1. This is an index page, not the full collection.