# Cancer Subtype Classification on Pan-cancer 32-class

Source: [Cancer Subtype Classification on Pan-cancer 32-class](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class>)

Collection index: [llms.txt](<https://www.sota2.com/research/llms.txt>)

Data updated: 2026-06-02T07:37:36.439Z

Evaluation of Cancer Subtype Classification performance on the 32-class Pan-cancer dataset, reporting metrics such as Accuracy, F1 scores, and AUC.

A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage.

| Scope | Recorded value |
| --- | --- |
| Task | Cancer subtype classification |
| Dataset (including any stated split) | Pan-cancer 32-class |
| Metric | Accuracy |
| Unit | SCALAR |
| Direction | Higher is better |
| Results loaded | 7 of 7 |
| Coverage | All results currently returned for this benchmark |

Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol.

## Metrics

- [Accuracy](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class.md?metric=Accuracy>): Higher is better; unit: SCALAR.

- [Macro F1 Score](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class.md?metric=Macro%20F1%20Score>): Higher is better; unit: SCALAR.

- [Weighted F1 Score](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class.md?metric=Weighted%20F1%20Score>): Higher is better; unit: SCALAR.

- [Macro Recall](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class.md?metric=Macro%20Recall>): Higher is better; unit: SCALAR.

- [Macro AUC](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class.md?metric=Macro%20AUC>): Higher is better; unit: SCALAR.

- [Macro AUPRC](<https://www.sota2.com/research/sota/cancer-subtype-classification-on-pan-cancer-32-class.md?metric=Macro%20AUPRC>): Higher is better; unit: SCALAR.

## Recorded results

| Method | Accuracy | Result date | Report paper |
| --- | --- | --- | --- |
| CMGL | 0.9682 | Not recorded | 69f03f7055a3c32af89fa47a |
| MOGONET | 0.9666 | Not recorded | 69f03f7055a3c32af89fa47a |
| MOSGAT | 0.9643 | Not recorded | 69f03f7055a3c32af89fa47a |
| MOGKAN | 0.9628 | Not recorded | 68fa5f7c1e209131ce9ea3ff |
| HTML | 0.9577 | Not recorded | 69f03f7055a3c32af89fa47a |
| MOCapsNet | 0.9464 | Not recorded | 69f03f7055a3c32af89fa47a |
| GTN | 0.9356 | Not recorded | 68fa5f7c1e209131ce9ea3ff |

### CMGL

Accuracy: 0.9682. Result ID: 69f086f847f34ce924d709b0.

[Reporting paper](<https://www.sota2.com/research/paper/69f03f7055a3c32af89fa47a.md>)

[Method origin paper](<https://www.sota2.com/research/paper/69f03f7055a3c32af89fa47a.md>)

Recorded evaluation configuration: {"validation":"5-fold cross-validation"}. This record does not assert independent reproduction.

### MOGONET

Accuracy: 0.9666. Result ID: 69f086f847f34ce924d709b3.

[Reporting paper](<https://www.sota2.com/research/paper/69f03f7055a3c32af89fa47a.md>)

Recorded evaluation configuration: {"validation":"5-fold cross-validation"}. This record does not assert independent reproduction.

### MOSGAT

Accuracy: 0.9643. Result ID: 69f086f847f34ce924d709b4.

[Reporting paper](<https://www.sota2.com/research/paper/69f03f7055a3c32af89fa47a.md>)

Recorded evaluation configuration: {"validation":"5-fold cross-validation"}. This record does not assert independent reproduction.

### MOGKAN

Accuracy: 0.9628. Result ID: 6a1e8839fbc373592c185618.

[Reporting paper](<https://www.sota2.com/research/paper/68fa5f7c1e209131ce9ea3ff.md>)

[Method origin paper](<https://www.sota2.com/research/paper/68fa5f7c1e209131ce9ea3ff.md>)

Recorded evaluation configuration: {"mRNA":"True","miRNA":"True","DNA methylation":"True","validation\_mode":"5-fold cross-validation"}. This record does not assert independent reproduction.

### HTML

Accuracy: 0.9577. Result ID: 69f086f847f34ce924d709b1.

[Reporting paper](<https://www.sota2.com/research/paper/69f03f7055a3c32af89fa47a.md>)

Recorded evaluation configuration: {"validation":"5-fold cross-validation"}. This record does not assert independent reproduction.

### MOCapsNet

Accuracy: 0.9464. Result ID: 69f086f847f34ce924d709b2.

[Reporting paper](<https://www.sota2.com/research/paper/69f03f7055a3c32af89fa47a.md>)

Recorded evaluation configuration: {"validation":"5-fold cross-validation"}. This record does not assert independent reproduction.

### GTN

Accuracy: 0.9356. Result ID: 6a1e8839fbc373592c185619.

[Reporting paper](<https://www.sota2.com/research/paper/68fa5f7c1e209131ce9ea3ff.md>)

Recorded evaluation configuration: {"Authors":"Kaczmarek et al."}. This record does not assert independent reproduction.

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