# Inference of non-exponential kinetics through stochastic resetting

Source: [Inference of non-exponential kinetics through stochastic resetting](<https://www.sota2.com/research/paper/68fa483a1e209131ce92de7e>)

Collection index: [llms.txt](<https://www.sota2.com/research/llms.txt>)

Data updated: 2025-10-25T06:43:36.791Z

Authors: Ofir Blumer, Shlomi Reuveni, Barak Hirshberg

Published: 2024-10-13T11:32:10.000Z

## Abstract

We present an inference scheme of long timescale, non-exponential kinetics from Molecular Dynamics simulations accelerated by stochastic resetting. Standard simulations provide valuable insight into chemical processes but are limited to timescales shorter than $\\sim 1 \\mu s$. Slower processes require the use of enhanced sampling methods to expedite them, and inference schemes to obtain the unbiased kinetics. However, most kinetics inference schemes assume an underlying exponential first-passage time distribution and are inappropriate for other distributions, e.g., with a power-law decay. We propose an inference scheme that is designed for such cases, based on simulations enhanced by stochastic resetting. We show that resetting promotes enhanced sampling of the first-passage time distribution at short timescales, but often also provides sufficient information to estimate the long-time asymptotics, which allows the kinetics inference. We apply our method to a model system and a short peptide in an explicit solvent, successfully estimating the unbiased mean first-passage time while accelerating the sampling by more than an order of magnitude.

## Recorded benchmark results

A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage.

## Original sources and implementation

[Original paper](<https://arxiv.org/abs/2410.09805>)

[PDF](<https://arxiv.org/pdf/2410.09805.pdf>)
